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1. en.wikipedia.org › wiki › Spaced_seedSpaced seed - Wikipedia

   en.wikipedia.org › wiki › Spaced_seed

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   In bioinformatics, a spaced seed is a pattern of relevant and irrelevant positions in a biosequence and a method of approximate string matching that allows for substitutions. They are a straightforward modification to the earliest heuristic-based alignment efforts that allow for minor differences between the sequences of interest.

2. territorialseed.com › products › easy-seederEasy Seeder Planter for Perfectly Spaced Seeds - Territorial Seed

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   Perfectly spaced seeds with no thinning required! For fast, easy, efficient planting, simply make a furrow with an end of the Easy Seeder, lay it down and slide your seeds along it for perfect spacing. The seeds will fall through the pre-drilled holes. Thinning seedlings will be a thing of the past! Includes 6 plastic planting guides for use ...

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   What is a spaced seed?

   • In bioinformatics, a spaced seed is a pattern of relevant and irrelevant positions in a biosequence and a method of approximate string matching that allows for substitutions. They are a straightforward modification to the earliest heuristic -based alignment efforts that allow for minor differences between the sequences of interest.

   Spaced seed - Wikipedia

   en.wikipedia.org/wiki/Spaced_seed

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   How do spaced seeds work?

   • When several mismatches are set, resulting spaced seeds are guaranteed to find all positions within a reference sequence. Each periodic seed consists of an integer number of periodic blocks and a “remainder” (a number of the first symbols of the block). The size of the periodic block is the difference between the read’s and seed’s lengths plus one.

   PerFSeeB: designing long high-weight single spaced seeds for full

   bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-023-05517-4

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   What are spaced seeds in Zoom software?

   • In ZOOM software [ 14 ], spaced seeds are generated to perform alignment with at most two mismatches. In PerM software [ 15 ], the authors used so-called periodic spaced seeds to improve mapping efficiency. Fast alignment-free string comparison based on spaced seeds (spaced-words) is discussed in [ 16 ].

   PerFSeeB: designing long high-weight single spaced seeds for full

   bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-023-05517-4

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   Should we use spaced seeds?

   • Even this very simple tweak helps us a lot: the average number of hits decreased to 1190: if we use spaced seeds in this context, we have almost 10% fewer hits to worry about, and (under reasonable assumptions) we are just as likely to have found the location we want.

   Short read alignment: seeding - Seven Bridges Genomics

   www.sevenbridges.com/short-read-alignment-seeding/

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4. bmcresnotes.biomedcentral.com › articles › 10Efficient computation of spaced seeds - BMC Research Notes

   bmcresnotes.biomedcentral.com › articles › 10

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   Feb 28, 2012 · Multiple spaced seeds are being successfully used in bioinformatics software programs. Enabling researchers to compute very fast high quality seeds will help expanding the range of their applications. Background. The most frequently used tools in bioinformatics are those searching for similarities, or local alignments, between biological sequences.

   • Author: Silvana Ilie
   • Email: silvana@ryerson.ca

   • Publish Year: 2012

5. pageseed.comPage Seed

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   American owned & operated, The Page Seed Company, Inc. has provided quality products to professional horticulturalists & hobby gardeners since 1896. As one of the largest seed companies in the world, we offer multiple brands for retail markets, wholesale packaging and distribution for branded programs, custom imprinted products for business ...

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6. www.sevenbridges.com › short-read-alignment-seedingShort read alignment: seeding - Seven Bridges Genomics

   www.sevenbridges.com › short-read-alignment-seeding

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   Jun 4, 2013 · One consequence of this is that spaced seeds tell you more about reads than non-spaced ones (the way that a fingerprint tells you more about the body it comes from than a fingerprint-sized patch of elbow skin would). An example: spaced vs. non-spaced seeds

7. bmcbioinformatics.biomedcentral.com › articles › 10PerFSeeB: designing long high-weight single spaced seeds for ...

   bmcbioinformatics.biomedcentral.com › articles › 10

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   Oct 24, 2023 · Spaced seeds (masks ignoring symbols at specific locations) are a way to approach the task. An ideal (full sensitivity) spaced seed should enable us to find all such positions subject to a given maximum number of mismatches permitted. Results. Several algorithms to assist seed generation are presented.

8. www.neseed.comNE Seed

   www.neseed.com

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   Since 1987, our commercial seed company has provided outstanding vegetable, flower, and herb seeds in bulk and packets to commercial growers and home gardeners. Featured. Golden Girl F1 Hybrid Summer Squash Seeds. From $2.89 USD. Choose options. Nano Verde di Milano Zucchini Summer Squash Seeds. $5.29 USD. Add to cart.