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- Season 1
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- Season 3
- Season 4
- Season 5
- Season 1 overviewJul 16, 2004-Mar 25, 200518 episodesSeason 1 episodes1. Rising Jul 16, 2004
- A new Stargate team heads to an unknown galaxy.
- 2. Hide and Seek Jul 23, 2004
- The crew unleashes an entity that threatens to drain the city's power supply.
- 3. Thirty-Eight Minutes Jul 30, 2004
- The Atlantis team is in danger when the puddle jumper lodges in the Stargate.
- 4. Suspicion Aug 6, 2004
- Relationships rend when others accuse the Athosians of harboring a spy.
- 5. Childhood's End Aug 13, 2004
- The Atlantis team discovers a tribe of children whose beliefs lead them to ritual suicide.
- 6. Poisoning the Well Aug 20, 2004
- A human civilization may have developed a weapon against the Wraith.
- 7. Underground Aug 27, 2004
- Teyla introduces the Atlantis team to a group of simple farmers.
- 8. Home Sep 10, 2004
- Members of the Atlantis team learn that they may not be able to return to Atlantis.
- 9. The Storm Sep 17, 2004
- A large storm threatens to destroy the city; the Atlantis team faces a threat from the Genii.
- 10. The Eye Jan 21, 2005
- When an approaching storm forces city residents to evacuate, the Genii launch an invasion.
- 11. The Defiant One Jan 28, 2005
- While investigating a distress signal, Sheppard and McKay become the target of a hungry Wraith.
- 13. Hot Zone Feb 4, 2005
- McKay must stop a deadly virus from spreading throughout the population of Atlantis.
- 14. Sanctuary Feb 11, 2005
- The Atlantis team discovers a planet and people completely untouched by the Wraith.
- 15. Before I Sleep Feb 18, 2005
- The Atlantis team revives a woman who has been in stasis for over 10,000 years.
- 16. The Brotherhood Mar 4, 2005
- The Atlantis team's search for a power source leads them into the hands of the vengeful Genii.
- 17. The Gift Mar 11, 2005
- The stress of the coming battle weighs on the team; Teyla explores her connection to the Wraith.
- 18. The Siege Mar 18, 2005
- Tensions boil over as the Atlantis team scrambles to fortify the city.
- 19. The Siege Mar 25, 2005
- The team struggles to hold off the Wraith's attack until reinforcements can arrive.